PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528967.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 227aa    MW: 24793.9 Da    PI: 10.106
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.000514971123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C+ C++ Fs+   L  H++ H
  XP_023528967.1 49 FYCKFCSRKFSNLQALGGHQNAH 71
                    79*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MASSGKSEGS EVELNLQHSF KVLKAEPGFE EVGTAMGTET RTKRETRVFY CKFCSRKFSN  60
LQALGGHQNA HKRERDIAKR EKAVAAAAAA MSFRTTTTAA AATSTDAFDS IGSFYHPYYS  120
AMAIQSLRNK ALGFPIRPPI RKPTRLQAVA HGCRWWPREQ YMAAAAAQQL HFGGLWQAAN  180
NGGRENLAAT ELESIAMASR NASSSSSSQI FGADQYNIHG LDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.19e-13C2H2 family protein