PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023528880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 247aa MW: 27380.6 Da PI: 7.069 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 115.7 | 1.9e-36 | 14 | 67 | 7 | 60 |
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvP+Ggg+r++++ XP_023528880.1 14 NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRRHRR 67 8**************************************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence |
MDRGWKPMVE ISPNCPRCGS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG GSLRNVPIGG 60 GCRRHRRPAK PLTLSPSPSN PKFHHTNGTS SLHHNHRLPD PDMSPVIDLA VVYANFVNQK 120 LTTPGTITAD STTSNAAGES GNLCEFSMQE CGLGGNEYQV AGCFGLEENS ENQVDNIEVA 180 ARELQLPPLP GEEMVGGWAN SMIMNHHHHH LQPTRVEVFG METQDPTLVG GNWSPIDLSN 240 YETFSRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G52440.1 | 2e-51 | Dof family protein |