PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528880.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 247aa    MW: 27380.6 Da    PI: 7.069
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof115.71.9e-361467760
          zf-Dof  7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                    +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvP+Ggg+r++++
  XP_023528880.1 14 NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRRHRR 67
                    8**************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDRGWKPMVE ISPNCPRCGS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG GSLRNVPIGG  60
GCRRHRRPAK PLTLSPSPSN PKFHHTNGTS SLHHNHRLPD PDMSPVIDLA VVYANFVNQK  120
LTTPGTITAD STTSNAAGES GNLCEFSMQE CGLGGNEYQV AGCFGLEENS ENQVDNIEVA  180
ARELQLPPLP GEEMVGGWAN SMIMNHHHHH LQPTRVEVFG METQDPTLVG GNWSPIDLSN  240
YETFSRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-51Dof family protein