PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23367.3 Da PI: 6.2838 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.7 | 2.8e-13 | 38 | 87 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ykGVr++ +g+Wv+e+r p n k+ +f++g+f ++e+Aa a++ ++ ++ge XP_023528801.1 38 IYKGVRQR--NGKWVSELRWP--N-KNSTFWVGTFCSPEMAAVAYDVVALTIKGE 87 69***975..6******6665..3.37*********************9999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MPSSSSSSTN EHLPPSQKTA STKRKAGRKK FQETRHPIYK GVRQRNGKWV SELRWPNKNS 60 TFWVGTFCSP EMAAVAYDVV ALTIKGESAP LNFPNWTHLF PRVTSSSSSI NDIRTMAVEA 120 AEAFTSSNRL SSLSSSSLCS SLTSEEKVTP KVLTDRLVLD EEEVFNMPAI IADMAEGLIL 180 TPPGMKKGFN WEEYEDTVEL SLWNDDGEKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 1e-41 | ERF family protein |