PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 228aa MW: 25665.1 Da PI: 9.3851 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.1 | 1.5e-08 | 148 | 189 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR++i +++ L++l+P K++ a++L +A Y+k L XP_023528594.1 148 AARKRREKISEKIRALQRLVPGG-----SKMDTASMLDEAASYLKFL 189 669******************95.....5****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MDDLLWNGSW SNEEDNRCNE SLFVSGDPRH CSILPLQELQ IVARTLRLRE VAKDEGASME 60 ELENDKGIAP KGGVLDIFEN QKPKQQNSTT SSSNNDQVKP FNRDRAMSQM KELVYYAAVF 120 RPVSSGSETV EKKRRRNVKT SKEPQTVAAR KRREKISEKI RALQRLVPGG SKMDTASMLD 180 EAASYLKFLR AQIKALEGLS YKLGSIDCLS TSTSFNPPFP TINAYFPL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 153 | KKRRRNVKTSKEPQTVAARKRR |
2 | 132 | 155 | KKRRRNVKTSKEPQTVAARKRREK |
3 | 133 | 154 | KKRRRNVKTSKEPQTVAARKRR |
4 | 133 | 156 | KKRRRNVKTSKEPQTVAARKRREK |
5 | 134 | 155 | KKRRRNVKTSKEPQTVAARKRR |
6 | 150 | 155 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21330.1 | 3e-33 | bHLH family protein |