PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528487.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 204aa    MW: 22109.5 Da    PI: 8.3522
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.42.1e-401675261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    ++++lkcprCdstntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+
  XP_023528487.1 16 EQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR 75
                    57899***************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MQDLSMFQPI KPQFPEQEQL KCPRCDSTNT KFCYYNNYNL SQPRHFCKNC RRYWTKGGAL  60
RNIPVGGGTR KNSKRPAVAT VKRPPSSSSS SSSTLTNSNP IRGYGGGLDI PGSLSSLLVS  120
NGQFGNLLEG VDPNQSEMKM VESGEFSENL DSEGGRKSAA EEQNTGMPGN YLGVLQNSDS  180
SCWTGGGSNG WPDLAIFTPG SSYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.12e-43Dof family protein