PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528485.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 256aa MW: 27649.3 Da PI: 9.4074 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.6 | 0.00087 | 92 | 114 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H +H XP_023528485.1 92 YQCKTCDRYFPSFQALGGHRASH 114 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 14 | 0.00015 | 168 | 190 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_023528485.1 168 HECSICGAEFSSGQALGGHMRRH 190 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MAETPDENQA QIMKGKRTKR SRPPSVSSAS SAADCSSSSA GLAREGEEDQ DLANCLMLLA 60 QGRTRTGACS SSSSSPVLVR QKLAANQSLF LYQCKTCDRY FPSFQALGGH RASHKKPKFN 120 NIVNTSVPQP HFTPSDSIQL SLQLSTTSRL PPPPPPAAVN DLIKPKVHEC SICGAEFSSG 180 QALGGHMRRH RALTANPTRG ATTTTTTTTP QLQDLMTKKK RNMLELDLNL PAPEEDRHRP 240 PVAVFSGASP LVDCHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 1e-43 | C2H2 family protein |