PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528443.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 419aa MW: 45319.7 Da PI: 6.7366

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.2e-38	99	158	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP+G+grr+nk+ XP_023528443.1 99 PDKIIPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRRNKQL 158 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MTSSTTDDVA AAPHFKDLAI KLFGRTIPLK ESQISAAPRL NRDACNNWKQ AEQSVPGAED 60 SCRSERSSVL VGDNEEHRAS KEEQMDGNGT DQERAFKKPD KIIPCPRCNS LETKFCYFNN 120 YNVNQPRHFC KNCQRYWTAG GTMRNVPIGA GRRRNKQLAS QYRQIIVSSE GVAATTRLET 180 SGVESTGNGT VLKFGSEAAP LCESMETVLS LGDQKRSIEI GCGDSPEEPS SCGSSMTTTS 240 IRRNELPNSS TEIAGSNTVH CYPVPQLVFP LNQGGNGVIP SAMAQTSDTT SSHPNPVQWL 300 PATMLAVPGF CGPSLPLQFV PASYWGCTPV WTTGSSDVCA SQTSPATIGR CPTTSSPTLG 360 KHSRDADSLT EEEKPEKCVV IPKTLRVNNP SEASRSPMWT TLEAPNILEA KNGSFYSLL

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MTSSTTDDVA AAPHFKDLAI KLFGRTIPLK ESQISAAPRL NRDACNNWKQ AEQSVPGAED  60
SCRSERSSVL VGDNEEHRAS KEEQMDGNGT DQERAFKKPD KIIPCPRCNS LETKFCYFNN  120
YNVNQPRHFC KNCQRYWTAG GTMRNVPIGA GRRRNKQLAS QYRQIIVSSE GVAATTRLET  180
SGVESTGNGT VLKFGSEAAP LCESMETVLS LGDQKRSIEI GCGDSPEEPS SCGSSMTTTS  240
IRRNELPNSS TEIAGSNTVH CYPVPQLVFP LNQGGNGVIP SAMAQTSDTT SSHPNPVQWL  300
PATMLAVPGF CGPSLPLQFV PASYWGCTPV WTTGSSDVCA SQTSPATIGR CPTTSSPTLG  360
KHSRDADSLT EEEKPEKCVV IPKTLRVNNP SEASRSPMWT TLEAPNILEA KNGSFYSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	9e-62	Dof family protein