PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 519aa MW: 56363.8 Da PI: 5.3948 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.5 | 2.7e-09 | 335 | 383 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_023528350.1 335 NSHSLAERVRREKISERMRLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 383 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 519 aa Download sequence |
MNGKDEFEDE CRTSDPMSIS SSWQFANESI GFVSTGNPSV VSNGDLGVSS CPSTSMSNLF 60 TPTVLNDHTN SQSSRFCSGF NEQNSIDDSN VTVVDGEGLS SLRSSSDRIL GMDWNQQSSW 120 MKGVFSGNVP GMFPANLSQL PADSAFIERA ARFSCFNGGV FGAPPAGSFG ISGSNGIHSR 180 GAFGSQELNK VVLEGKEKSP PKTEKESEMS RDRAKQGCVG ESGNESDETG FSGGQDEQCT 240 LGGTIAEPSR EGLCFKKRKR GDRNMELAQV KEAPKQINET AKNGALTWQN GDKDQNPSFT 300 TNKPAGKQGK QDSQPSDAPK EEYIHVRARR GQATNSHSLA ERVRREKISE RMRLLQDLVP 360 GCSKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPKL DFNIEELLTK EIMQSKAGPS 420 LFGFPPDLPM PYLPQHPTHH GVIPPCIPNM GSSPDLLRRT INSQLTSLVG GFKEPVQLPN 480 VWENELHNVV PRNFDVAAPP SGQDVDGSTP PCNNTRAEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 3e-87 | bHLH family protein |