PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528217.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 172aa MW: 19280.6 Da PI: 9.5443

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.3e-33	92	150	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H+h+ XP_023528217.1 92 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHS 150 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MENYQMFFPC SNGGGLSAFS QPDISSGTAS DMFRNFHGGD PQASGVLGLK TEVVTAAVEA 60 DGNCGGSGNK KGEKKVRKPR YAFQTRSQVD ILDDGYRWRK YGQKAVKNNK FPRSYYRCTH 120 QGCNVKKQVQ RLTRDEGVVV TTYEGMHTHS IDKPTDNFEQ ILSRMQIYST PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-54	WRKY family protein