PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528127.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 299aa MW: 33409 Da PI: 9.359

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.8	5.2e-34	137	194	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt+++C+vkk+ver+++dp+++++tYeg+H+h+ XP_023528127.1 137 EDGYRWRKYGQKAVKNSPFPRSYYRCTTPTCNVKKRVERCSNDPTILVTTYEGQHTHP 194 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MEEVKKKKKE EIIKSEDPST SGGGGGGIFP FSDKMRLNGF FDFPDGEKCS VGFLEMLGLN 60 NHEFKGNSSQ VLNPPATPNR SSSVSSASTD AVIDNPQQQQ QNPTKKSKKK VKKKKKEKRE 120 KEGRFAFMTK SEVDHLEDGY RWRKYGQKAV KNSPFPRSYY RCTTPTCNVK KRVERCSNDP 180 TILVTTYEGQ HTHPTPILLP PPLSTPPCIH LPPMPCLPPT NNNHDGDIIG AMCDEYTQNP 240 AFLNSQHLEA NYTINNLIGA RKAAAGMLQQ KRLCNPNATF LVDHGLLQDV IPAHMLKQE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	113	KKSKKKVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62340.1	4e-38	WRKY family protein