PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 549aa MW: 60179 Da PI: 5.2049 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 386.8 | 2.5e-118 | 174 | 532 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 lv+ Ll+cA+avs+++l+la+a+L++++ l+ + +++++a +f++AL r++r + l+p + s ++ +++l + f+e +P+lkf+h XP_023528124.1 174 LVHSLLACADAVSQNNLNLAEAILKHIKILVDVQTGAVRKVAGFFAQALTYRIYR-----FYPLKPFDCS-SSYTDQL--QIHFYESCPYLKFAH 260 689****************************************************.....4455555554.2233333..335************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +taNqaIle++ + vH+iDf+++qGlQWp+L+qaLa Rp+gpp + +Tg++sp + l+++g +L++fAe++gv+fef+ +++k++ dle XP_023528124.1 261 FTANQAILESIGLSGSVHVIDFNLQQGLQWPPLIQALALRPGGPPAFYLTGISSP---PGDGLQKVGTKLTNFAEKFGVKFEFRGFYCKNFGDLE 352 ******************************************************5...69*********************************** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285 + +L+++ E++a+n++++lhrll+ ++ +++ L ++k l+Pkv+++veq a+hn++sF+erf+eal+yys+lfd+le+ + s + + XP_023528124.1 353 PFMLDLE-SETVAINSIFELHRLLAYPGVIQK----ALTTIKALNPKVITLVEQVANHNGPSFMERFTEALHYYSSLFDALEEASVAGSLDV-VR 441 ****996.7***************99999999....*********************************************66644555555.55 PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk.vk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++e+lgr+i+nvv ceg++r+erhet+++W +r++++GF+ ++l+++a kqa++ll+ ++ +gy+vee++gsl+lgW++rpL+++SaW+ XP_023528124.1 442 SEEYLGRQICNVVGCEGTDRVERHETVAQWLSRMQSSGFEMIHLGSNAFKQANTLLSAlFHgRNGYKVEENNGSLTLGWHTRPLIATSAWT 532 5556**************************************************997526689***************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
MKQDNTHQSP NPAAAETEKL AVGDQDEDEL LAALGYNVRS SDMSDVALKI EQLEMVMGLS 60 EHDGISHLSS NTIHYNPSDM SSWIETMIDE LNNPVHVGDE SIPAIATTAA FTDDSEYDLR 120 VIPGIAAYPQ LNSTTTRKRC KNFDCESVLV KAPSFSEPSR SVVLVDSAET GVHLVHSLLA 180 CADAVSQNNL NLAEAILKHI KILVDVQTGA VRKVAGFFAQ ALTYRIYRFY PLKPFDCSSS 240 YTDQLQIHFY ESCPYLKFAH FTANQAILES IGLSGSVHVI DFNLQQGLQW PPLIQALALR 300 PGGPPAFYLT GISSPPGDGL QKVGTKLTNF AEKFGVKFEF RGFYCKNFGD LEPFMLDLES 360 ETVAINSIFE LHRLLAYPGV IQKALTTIKA LNPKVITLVE QVANHNGPSF MERFTEALHY 420 YSSLFDALEE ASVAGSLDVV RSEEYLGRQI CNVVGCEGTD RVERHETVAQ WLSRMQSSGF 480 EMIHLGSNAF KQANTLLSAL FHGRNGYKVE ENNGSLTLGW HTRPLIATSA WTVPVASGTG 540 TSTGTGGPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03450.1 | 0.0 | GRAS family protein |