PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528087.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | CAMTA | ||||||||
Protein Properties | Length: 886aa MW: 98051.3 Da PI: 6.5383 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 55.5 | 1.2e-17 | 4 | 45 | 76 | 117 |
CG-1 76 ggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 g+v+vl+cyYah+e+n +fqrr+yw+L+e+le+ivlvhy+ev XP_023528087.1 4 GSVDVLHCYYAHGEDNDNFQRRSYWMLDEQLEHIVLVHYREV 45 579*************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 886 aa Download sequence |
MVSGSVDVLH CYYAHGEDND NFQRRSYWML DEQLEHIVLV HYREVNEGYR SGVSRVSVDP 60 GSLAEGCQGG STPIFMQETS LVGSVHTSSP LSPMQTVRSE NGGVDSSARN DSGISSDVHH 120 VFKSSMLPAS LPAGDVSGSS DLCGQEIVII QSAITDSITH KLIDARLASS GLVKNMVNSG 180 HGLIADAEVP AAKAVSQRIV QKKKHGLITV PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE 240 GFGELKKLDS FGRWMDKEIG RDCDDSLMTL DSGNYWCALD AGNDEKEVSS LSHHMQLDID 300 SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV LIVGSFLGSK KLPVETQWGC MFGEVEVSAE 360 ILSNSVLRCQ TPLHAPGRIP FYVTCCNRLA CSEVREFEFR EKPPTLSVPN AIKCASEDEL 420 RFQMRLTRLL NLCLEEKWLD CPIKNCEKCK IVGLMKSSRS DIAKWRMMEG ISIPLISDGM 480 DPRDFMIQTL LVDKLCEWLA CKVHEGTMGT PVLDEEGLGV IHLAAALGYA WTIGPIIASG 540 VSPNFRDSKG RTALHWASYF GREETVATLV RLGVSPGAVD DPTSGFPGGQ TAADLASSRG 600 HKGIAGYLAE ADLTAHLRSL TDGENLKDNV KENVNVDETI QTADVVSSQL AEDELLSLKG 660 SLAAVRKSVH AAALIHAAFR ARSFRHKQLM GSDKEMIHEE SIDLVALGIL NKAEKIHYED 720 YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV KIQAHVRGYQ VRKLYRKVIW TVSIVEKAIL 780 RWRRKRVGLR GFKAEGATGE VASSHSQVEK SDDYEFLRIG RQLKYADVEK ALSRVKSMAR 840 SPEARHQYMR LVTKFHIFKQ INDEEPSGSN EDGSSQEIQK EEQNLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09410.2 | 1e-153 | CAMTA family protein |