PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528024.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 266aa    MW: 28400.6 Da    PI: 8.1747
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002185107123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023528024.1  85 FSCNYCQRKFYSSQALGGHQNAH 107
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MNLPISEPSP SETSTIISAS ESSPSCPKGD PTTDQINLNS HLGLDLTLSN NDSDHGSNPE  60
LNLIHSFDAN LATEPTDGET EPRVFSCNYC QRKFYSSQAL GGHQNAHKRE RTLAKRTQRI  120
GTGSNFGLPH RYSSLASLPL HGSLSRSLGI QAHSMVHKPS LHVSAIGSAG IYGHSEWSRK  180
PLDQHPAIGR LMQGNSHVGS FRGISSDTGA ARFEGVGKLS PAAVTEAPPP HGGFWWGSGG  240
GGGGFNHLKM KPKQDELLKL DLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.17e-45C2H2 family protein