PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 329aa MW: 36767.5 Da PI: 5.6241 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96 | 2.5e-30 | 153 | 211 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr YYrC+s+ gC+++k+ver+++dp ++++tY+ eHnh+ XP_023528010.1 153 SDIWAWRKYGQKPIKGSPYPRXYYRCSSSkGCMARKQVERNRSDPGMFIVTYTAEHNHP 211 79*************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MKMEVDWDLH AVVRGYSAVS SAATIPSSDF YSVSSTSNNS TPFAFGRDLT NQTNHFFSLQ 60 DPFEGPNCNS TEELHELFKP FSPKPLPSPP PPPPSAPLLL SSPAAKILTH QKQRQNTHVP 120 KQLHSAPVSA SRSKRRKNQL KKVCQVPAES LSSDIWAWRK YGQKPIKGSP YPRXYYRCSS 180 SKGCMARKQV ERNRSDPGMF IVTYTAEHNH PAPTHRNSLA GSTRQKPNTQ TPASSGSEKP 240 DPKQPVCSSE DQSTITESKE EKEELLAEDE EDDDLGVSDL IVNDDFYMGF EELDSPITDE 300 CFSDQFPANF ELPWSFNGDP DSEIVKLPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 3e-67 | WRKY family protein |