PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023527679.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 384aa    MW: 42689.2 Da    PI: 5.0859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023527679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.8e-20117166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++G+r+++ +g+W+AeIrdp++    +r++lg+f taeeAa+a++a +++++g
  XP_023527679.1 117 KFRGIRQRP-WGKWAAEIRDPTK---GARVWLGTFNTAEEAARAYDAEALRIRG 166
                     89*******.**********965...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MCGGAIISDF IPPTRSDRVT ADHLWPDLKK PKSGKHSSVK KSLRSQIFDV DDFEADFQDF  60
KDDSDADFDE DHFSDVKPFL FSAPNSACSS TRGSSATKLV EFNGQTDKSA STKRKNKFRG  120
IRQRPWGKWA AEIRDPTKGA RVWLGTFNTA EEAARAYDAE ALRIRGKKAK LNFPDEPLHN  180
TQKRKNSQNV KHLNMNLKAN QAGANQHLKF SNHPDQNYYR TTGFLEAKPP TDQLGYMDSF  240
PAGMDSTPSD EMLLYFNSDE GSNSIGGSDF GWRDQGVKTP EISSVFSATF ESIDSQFTED  300
MNPRKKLRCS SGDAITAEEV GAKTLSEELS SFESQMKCFQ MPYLEGEWDD SIDAFLGGVA  360
TQDGGNPVDL WSFNDLPAVV GGIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.32e-70ERF family protein