PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023527628.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YA | ||||||||
Protein Properties | Length: 330aa MW: 36045 Da PI: 9.1516 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 98.7 | 6e-31 | 162 | 218 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++I++RR+ Rak+ e++l +k+rkpy+heSRh hA+rRpRgsgGrF XP_023527628.1 162 DGPIYVNAKQYHGIIRRRKIRAKAMMENRL-AKTRKPYMHESRHLHAMRRPRGSGGRF 218 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MAPQTGYLKE HEGVVPNSLG QLSSSPARLW SGYGQGCQSF FGDFGQVKAS STIQQLGSNG 60 KEFTGTEQAL QVAAHGFEKL NTAPFSIYPG DCKISVDPQK PSPIFSLQSP LSEYHNRFEL 120 GFGQPMVCAN YPYMEQHYGI LSAYAPQIPG RIMLPMSLTT DDGPIYVNAK QYHGIIRRRK 180 IRAKAMMENR LAKTRKPYMH ESRHLHAMRR PRGSGGRFLN TKALKNGKAS MEPKKFEDIN 240 LSDSTGSSQC SVVLQSESGA LNSPNEGKGR GFSLSSSEVS SMLSRGLQQF QINQLGPSMQ 300 SLAEIIDGGG HGMVLPKWVA AVDNCCDLCV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.2 | 5e-44 | NF-YA family protein |