PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023527625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HSF | ||||||||
Protein Properties | Length: 437aa MW: 49002.3 Da PI: 6.2465 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 107.6 | 9.5e-34 | 48 | 139 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+++++ed++++ ++sw + g+sfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+k+++++ weF++ F++gkk ll++ XP_023527625.1 48 FLWKTFDLVEDPAIDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYGFRKIDTDR---------WEFANGAFQRGKKYLLKN 133 99***************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_023527625.1 134 IQRRKS 139 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence |
MSSSSAHYLF DVMLEPDIGA SDPFVVLCMG SDVPQPLECL HGQLVPPFLW KTFDLVEDPA 60 IDPIVSWGSA GQSFVVWDPV EFSRVILPSN FKHNNFSSFV RQLNTYGFRK IDTDRWEFAN 120 GAFQRGKKYL LKNIQRRKSP HSEQIGSLIG PSTRGGKSGL EDEIGKLKKE RSMLLQEVVE 180 LQQQHKGTAQ HVITVNQRLR SAEQRQKQMI TFLSKLLRNP ELLFHLKKKK EPKDIDSERI 240 KRKFVKQHKH DGCTLSMEGK IETAMDLNPS LFEGPSANLV QGMGLFPDSI PNFQLMNASS 300 SDLIASEELA FHDGIVKPRE ELRVEASKAI GSPDYFGSLA EDILQSSHHG TGSIIKPEEI 360 WSAYLNVDAS TPGSSNELWS NPGGFEDKFW QVSCRQSSIW DLGSQQAGDL GMDKWSASGF 420 PFNDPDTQAY PKNTDQT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 227 | 246 | KKKKEPKDIDSERIKRKFVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 5e-83 | HSF family protein |