PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023527541.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SRS
Protein Properties Length: 292aa    MW: 31050.8 Da    PI: 8.9938
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023527541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702189.41.3e-581152717153
          DUF702   7 sCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalsstklssaeskke 99 
                      C+dCGn+akk+C+++RCRtCCk rg +C+thvkstWvpa++rrerq    +    ++ s+  ++a +kr++ l    +++++++++s+a+++++
  XP_023527541.1 115 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGSSgsSSAGAKRPKVL--IPSQTTAAASTSNATTPRS 207
                     6*********************************************9888776666655552255555555555..5556666667778888888 PP

          DUF702 100 letss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     +et+s          lP +v+++avf+c rv++++ ge el+Yq++v+igGhvfkG+LydqG++
  XP_023527541.1 208 FETTSshqdasfkksLPGQVRAPAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGAD 271
                     888888899999**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MLGLRDVLFI APTPSSLHQH TQIISSDHHP SLPLPSSTAL GVSVGIFPLL AATPCLQPPP  60
NQMPDEVSDR SRSLENLKRT QDFGFGKGDS LIGGGGNHGY DDQVKGDGGD GSLGVCRDCG  120
NRAKKECEYR RCRTCCKGRG NHCSTHVKST WVPASRRRER QMLVVMDGVA TSGSSGSSSA  180
GAKRPKVLIP SQTTAAASTS NATTPRSFET TSSHQDASFK KSLPGQVRAP AVFKCHRVTA  240
ISSGEGELTY QATVNIGGHV FKGFLYDQGA DVKNALPSIS QLHLESGNHL RD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.17e-56SRS family protein