PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023527525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 475aa MW: 51766 Da PI: 7.8295 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.4 | 3.1e-33 | 169 | 225 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh XP_023527525.1 169 NDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHA 225 7****************************************.***************7 PP | |||||||
2 | WRKY | 105.4 | 3e-33 | 318 | 375 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k++er+a+d ++v++tYeg+Hnhe XP_023527525.1 318 PDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCPVRKHIERAANDMRAVITTYEGKHNHE 375 6********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MNNINQSVNT VAGGSCEKRT NGLGMEAPKF KSLQPPPFPM SPSSYLSAFS SGLSPTELLN 60 SPLFSFGLFP SPTTASFNFR NDYDDADHQE MKADVKNYSN SSFNPQTRSS VSSYFQSSSS 120 NVTPLNPGGL SCDESGAKSE VVATDMAAAQ SNPVSQLPVY SREQKKSEND GYNWRKYGQK 180 QVKGSENPRS YYKCTFPNCP TKKKVERSLD GQITEIVYKG SHNHAKPQPT RRSGNSAVYD 240 PSAAESTLLR EDSSVSVGDD EVEPNSPFSN SVDDNENEPE SKRWKGENEN EGFSGGGSRT 300 VKEPRIVVQT TSEIDILPDG YRWRKYGQKV VKGNPNPRSY YKCTSLGCPV RKHIERAAND 360 MRAVITTYEG KHNHEVPAAR GGGGSFYNAV NRPVPANIPM PVRPSAAVSH SFPTNFPATF 420 LAGNINMSEI GARAASSSFP FQTSQGVPPS FQVSGFGTAA KEEAEDNMFF NSFLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-109 | WRKY family protein |