PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023527261.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 180aa    MW: 20587.8 Da    PI: 11.4564
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023527261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.3e-203584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+ kl+g
  XP_023527261.1 35 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDQAATKLYG 84
                    69****999.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
METCRDKKLH SSPLVKPWRK GPSRGKGGPQ NASCEYRGVR QRTWGKWVAE IREPKKRTRL  60
WLGSFATAEE AAMAYDQAAT KLYGPDAYLN LPHLLHNLPR NDINNASKSN FLKWVPSKKF  120
VSMFPHPRPA TFMLNLNAQP SLNLIHQRLQ QLTTPHGFLS PSLPSPSKTR VRTRKKTKLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.12e-48ERF family protein