PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023527179.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 290aa    MW: 33842.4 Da    PI: 8.8197
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023527179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.31.6e-35461372102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+yei+ed ++++++sws+ +nsfvv+d ++f+ ++LpkyFkh nf+SFvRQLn+YgF+kv+ ++         weF+h+sF +g+++ll+ 
  XP_023527179.1  46 FLTKTYEIIEDTATDHIVSWSRGNNSFVVWDLQSFSLTLLPKYFKHCNFSSFVRQLNTYGFRKVDPDK---------WEFAHESFLRGQRHLLKL 131
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_023527179.1 132 IRRRKA 137
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MNFSRQVKEE FPASSSSFSG GVLPPTATAP PPQPMEGIHE AGPPPFLTKT YEIIEDTATD  60
HIVSWSRGNN SFVVWDLQSF SLTLLPKYFK HCNFSSFVRQ LNTYGFRKVD PDKWEFAHES  120
FLRGQRHLLK LIRRRKALQP NVSHQAPDPC VEVGRFGLDG DVNQLQRDKQ VLMVEIVKLR  180
QQQQTMKTYL RTMERRLKKT ETKQQLMMNF LAKAIQNPDF IQHLIHQKHR HRELEDAINP  240
KRRRHIDQGQ PPVVNSVAID DQMNRKDESL EKDDDLDARF WENLLNNEDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-105HSF family protein