PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023527017.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 295aa MW: 32771.4 Da PI: 6.9739

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023527017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.6	1.4e-31	54	177	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................sss 68 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + s XP_023527017.1 54 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphiahrsefkinSG- 147 689*************************************************************555555555555444444433333322211. PP TCP 69 sasec.....eaesssssasnsssg........k 89 +++++ ++++++s++ XP_023527017.1 148 ----IdkveiDDDDDDEQKQHKSNSnpssfsalL 177 ....011122222222222222222223333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MPAGKHDERH TMITNSKEEN SPPKLAASSS SSAAVATPWL RLKDPRIVRV SRAFGGKDRH 60 SKVCTIRGLR DRRVRLSVST AIQLYDLQDR LGLNQPSKVV DWLLNVAKDE IDELPPLPIP 120 SASLGLHYQS MLPPHIAHRS EFKINSGIDK VEIDDDDDDE QKQHKSNSNP SSFSALLNNV 180 SAPPFGFHWD PSLSSSSSSS TTNLPFFTSQ AEDLHNFNHV TPLSLSTGSQ FLEFNNHLHQ 240 NFFINNSLNT PPPMHSITHP AVRPFHFSMA TKFVAQHKNN NGDPANKEDG FGSDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	4e-48	TCP family protein