PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023527016.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 293aa MW: 32702.4 Da PI: 7.1271

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023527016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.6	1.4e-31	52	175	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................sss 68 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + s XP_023527016.1 52 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphiahrsefkinSG- 145 689*************************************************************555555555555444444433333322211. PP TCP 69 sasec.....eaesssssasnsssg........k 89 +++++ ++++++s++ XP_023527016.1 146 ----IdkveiDDDDDDEQKQHKSNSnpssfsalL 175 ....011122222222222222222223333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MRKHDERHTM ITNSKEENSP PKLAASSSSS AAVATPWLRL KDPRIVRVSR AFGGKDRHSK 60 VCTIRGLRDR RVRLSVSTAI QLYDLQDRLG LNQPSKVVDW LLNVAKDEID ELPPLPIPSA 120 SLGLHYQSML PPHIAHRSEF KINSGIDKVE IDDDDDDEQK QHKSNSNPSS FSALLNNVSA 180 PPFGFHWDPS LSSSSSSSTT NLPFFTSQAE DLHNFNHVTP LSLSTGSQFL EFNNHLHQNF 240 FINNSLNTPP PMHSITHPAV RPFHFSMATK FVAQHKNNNG DPANKEDGFG SDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	3e-48	TCP family protein