PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526843.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26440.1 Da PI: 6.2516 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 65 | 114 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr + +g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++++g+ XP_023526843.1 65 FRGVRKRN-WGKWVSEIREPRK---KTRIWLGTYPTPEMAARAHDSAALAIKGH 114 8****887.**********843...6***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MEPFFNLTEE SDAKATTFCT SSSSSSSSSS SSSSSITTPW SQERQPVSQK RNQRRTQEQS 60 NHPMFRGVRK RNWGKWVSEI REPRKKTRIW LGTYPTPEMA ARAHDSAALA IKGHSAVLNF 120 PELAQFLPRP LSMSHKDIQA AAAQAAAATF STGTNHEGGG GEAAEKSREP LFPRSEGGDR 180 TEDSTNSTGD ETLFDLPDLF VGSCDLKEGF LHQSWSWQFC AAADNSGFRL EEPSFWELI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 1e-49 | ERF family protein |