PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526737.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 225aa MW: 25386.7 Da PI: 6.0543

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.1	1.8e-09	74	121	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rEr RR+r+N++f L l + + K++K +iL A++ +++L XP_023526737.1 74 SKACRERLRRERLNDRFLDLSIALEPG---RPSKNNKPAILDDAIRVLNQL 121 6789********************8...789*************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MDPLEDSSCW DFLDYSLFVD GDNIINPSLD PLWPPSDSRD SCAHTDVSAG RVESEQNDHS 60 RKRARDGSCA GPTSKACRER LRRERLNDRF LDLSIALEPG RPSKNNKPAI LDDAIRVLNQ 120 LKTEAEELKQ TNEKLLKEVE CLKAEKNDLR KERMNLKEDK ERIERQLKSI AIPPPGLIPG 180 HPAAYHAAPG KMAVFPGYGL IPMWQYLPPS VRDTSQDHEL RPPAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	85	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14410.1	3e-56	bHLH family protein