PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526634.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 314aa MW: 33937.6 Da PI: 7.1029

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.3e-34	52	106	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl XP_023526634.1 52 KPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 106 79****************************************************8 PP
2	Myb_DNA-binding	75	1.1e-23	54	105	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg t+ktI+rtmg kg+tl+++ks++qky+ XP_023526634.1 54 RLRWTAELHERFVDAVTQLGGAdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 105 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MLSGFSQEPA GMYSAIPALP MDGGGGGGKF QGSLDGTNLP GDACLVLTSD PKPRLRWTAE 60 LHERFVDAVT QLGGADKATP KTIMRTMGVK GLTLYHLKSH LQKYRLGKQS FKESTENSKD 120 ASCIAESQET SSSSSPSSKI IARDLNDSFQ VTEALRAQME VQRRLHEQLE VQRRLQLRIE 180 AQGKYLQSIL ERACRALSDQ AAASAGLEAV REELSELAMK VGNESKEMAP LEAQKVLPFS 240 ELAAALENPK APTVMPRVGD CSMDSCLTSA GSPVSPIGVG STTTGMKRPR PVFSHGDSMA 300 LEGNARHDVE WMMR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	291	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-123	G2-like family protein