PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023526547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 198aa MW: 23039.2 Da PI: 9.5438 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.7 | 3e-29 | 57 | 111 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt+eLH++F+++v+qLGG+ kAtPk++l+lmk +gLtl h+kSHLQkYR+ XP_023526547.1 57 KKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRI 111 78****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 45.9 | 1.3e-14 | 61 | 110 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT+e+++++ ++v qlGg t+k + m +g+tl ++ks++qky+ XP_023526547.1 61 KWTEELHQKFMNCVDQLGGTrkaTPKQLLHLMKtEGLTLIHIKSHLQKYR 110 8************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 198 aa Download sequence |
MHLDDDEELQ PKSLKKHQGE AQEQSSCCQE FSGDCSWSWE ELMGNENKKS KSRIGSKKRI 60 KWTEELHQKF MNCVDQLGGT RKATPKQLLH LMKTEGLTLI HIKSHLQKYR ISQHIRDFSK 120 AGKSERETDK ELMLANQNRG KQLVEAARQL LATQSSLNEQ LEVQKNLISA IEEQMKQLRG 180 VLERRGKPVV FRNEEERK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06800.1 | 6e-31 | G2-like family protein |