PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526474.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 361aa MW: 39947.9 Da PI: 7.027

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.5	1.6e-39	83	142	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk+s XP_023526474.1 83 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSS 142 7899******************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MSEPKDPAIK LFGKTIPLPE ASPPSPPPPS SLPGNHTTAS VNHDLDSPSS SFSPEGNIHG 60 DVEDLEADKN ETSNSQEKTL KKPDKILPCP RCNSMDTKFC YYNNYNVNQP RHFCKNCQRY 120 WTAGGVMRNV PVGAGRRKNK SSATHHRQII AMEALQQPRI DVCNGNVMAF GSDAAPLCES 180 MASILNIADK TRQNNEDDDE VIHNCEGVLP SIPFIPGAYT WNYGLYPPGI GMPMYPTAPI 240 WGAWTLPWVP QAAWMSPVGQ SHAPNSPTLG KHSRDKKGGE RCIWIPKTLR IDDPEEAAKS 300 SIWATLGIKN EKRDSVGEGV FKPFRFNDSD EQNERTKPTS VLELNPAALS RSIKFNENVY 360 H

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MSEPKDPAIK LFGKTIPLPE ASPPSPPPPS SLPGNHTTAS VNHDLDSPSS SFSPEGNIHG  60
DVEDLEADKN ETSNSQEKTL KKPDKILPCP RCNSMDTKFC YYNNYNVNQP RHFCKNCQRY  120
WTAGGVMRNV PVGAGRRKNK SSATHHRQII AMEALQQPRI DVCNGNVMAF GSDAAPLCES  180
MASILNIADK TRQNNEDDDE VIHNCEGVLP SIPFIPGAYT WNYGLYPPGI GMPMYPTAPI  240
WGAWTLPWVP QAAWMSPVGQ SHAPNSPTLG KHSRDKKGGE RCIWIPKTLR IDDPEEAAKS  300
SIWATLGIKN EKRDSVGEGV FKPFRFNDSD EQNERTKPTS VLELNPAALS RSIKFNENVY  360
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-85	Dof family protein