PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 483aa MW: 52579 Da PI: 9.7989 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 2.9e-05 | 68 | 90 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_023526466.1 68 FICEICNKGFQRDQNLQLHRRGH 90 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00056 | 145 | 167 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_023526466.1 145 WKCDKCSKKYAVQSDWKAHSKTC 167 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MSTNPFSLLS STPTSTPFAH HPDANPSPNP KPKPSAAAKK KRNLPGTPDP DAEVVALSPK 60 SLMATNRFIC EICNKGFQRD QNLQLHRRGH NLPWKLRQRT NKEPIKKKVY ICPEKTCVHH 120 DPSRALGDLT GVKKHFSRKH GEKKWKCDKC SKKYAVQSDW KAHSKTCGTR EYKCDCGTLF 180 SRKDSFITHR AFCDALAEES ARITTVSATN ILNNLRNDSV LLHQQDQSLI DHQTNNLQTL 240 GDVPALSQFT HSDHFLRDFE DHQHKNRSPF SLWLNNNNNI SNFYGPSSSS SNLFGSIAET 300 GLSMLPVFEK EDVEKKGSLS KATSSAAALL SGQSSSVVSS SPMSATALLQ KAALMGSTRS 360 STNNNSPLID AGAFGVMNSS SLSSSSSSNA VSLNSLNKSR SMTMADSVQM VGTNSDLSSN 420 ILSQLLMPLN NGNNSMKSND QTRDFLGVGG NGEAPQPPFL PPELAKFAAI NSTMGLSQFA 480 ANH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45260.1 | 1e-101 | C2H2 family protein |