PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526397.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CO-like

Protein Properties

Length: 338aa MW: 36999.8 Da PI: 4.4433

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	30.9	5.7e-10	17	59	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 +C+ +e ++q+ C+ + lC+ C e+H+ H++v XP_023526397.1 17 ICEACETAPAQFICKADAASLCAACDAEIHSAnplarrHQRVA 59 8*****************************6688888899876 PP
2	CCT	70.6	4e-24	269	312	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_023526397.1 269 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 312 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MLKTEGNYGG NGWGSIICEA CETAPAQFIC KADAASLCAA CDAEIHSANP LARRHQRVAI 60 SRGAMFPTAE EEEEEEEEEE EEQEEAASWL LMNPVKNNSG GSNKNNSNNG LFLFGGEDEE 120 AEEEEYLNFV EFNGNNNGFG NGDEEFEGLK NNYGGGGDSV VPIEFEGNKD DRILLQQSYG 180 GVVDASEFFH SASKPSYSYN AFLTHAISVS SMEVGVVPES TTAATVSDIS ISNMRPPRGT 240 IDLFSGTTAA SAAAAVVQLP ATQLSPMDRE ARVLRYREKK KTRKFEKTIR YASRKAYAET 300 RPRIKGRFAK RTDVEVELDR KFSNPLTVDG GYGIVPFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15850.1	3e-36	CO-like family protein