PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526228.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HSF

Protein Properties

Length: 448aa MW: 50390.1 Da PI: 7.0172

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.3	5.8e-34	13	103	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye+++d++++e++sws+++nsfvv+++ efa+ +Lp++Fkh+nf+SF+RQLn+YgF+k + e+ weF+++ F k+kk+ll++ XP_023526228.1 13 FLIKTYEMVDDSATDEIVSWSSSKNSFVVWNPPEFARVLLPTFFKHNNFSSFIRQLNTYGFRKKDAER---------WEFANEDFIKDKKHLLKN 98 9************************************************************99988.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_023526228.1 99 IHRRK 103 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MEAAAGGAGP APFLIKTYEM VDDSATDEIV SWSSSKNSFV VWNPPEFARV LLPTFFKHNN 60 FSSFIRQLNT YGFRKKDAER WEFANEDFIK DKKHLLKNIH RRKPIHSHSN PQGSHVDPER 120 AAFEDEIGRL SSEKTTIEAN ISRFKQKKSS AKLQLQELTM KVESMEKRQK NLLAFLEKAV 180 QNPSFVEHLA RRVESMDFTA FNKKRRLPSA DHSQPVVENS FLDSHCSSKS EPGNIFHQDF 240 SHKLRLETSC ASDINLISCS TQSSNEEGGS SQRNMSRAVQ EHLHFAAETL DLSDTGASFI 300 LKRDSSLTGK SPNDKSPLLH LLQPYVSSKE DGDSHISCHL NLTLASSSLR NNDTACSVRT 360 PQLDQNVRKS PDSKVISNGK ESDIRLGCPQ DTSMNNHGPP AAPIRVNDVF WEQFLTERPG 420 CPESEEADSN HRENLYKEPY DGRSGLSL

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MEAAAGGAGP APFLIKTYEM VDDSATDEIV SWSSSKNSFV VWNPPEFARV LLPTFFKHNN  60
FSSFIRQLNT YGFRKKDAER WEFANEDFIK DKKHLLKNIH RRKPIHSHSN PQGSHVDPER  120
AAFEDEIGRL SSEKTTIEAN ISRFKQKKSS AKLQLQELTM KVESMEKRQK NLLAFLEKAV  180
QNPSFVEHLA RRVESMDFTA FNKKRRLPSA DHSQPVVENS FLDSHCSSKS EPGNIFHQDF  240
SHKLRLETSC ASDINLISCS TQSSNEEGGS SQRNMSRAVQ EHLHFAAETL DLSDTGASFI  300
LKRDSSLTGK SPNDKSPLLH LLQPYVSSKE DGDSHISCHL NLTLASSSLR NNDTACSVRT  360
PQLDQNVRKS PDSKVISNGK ESDIRLGCPQ DTSMNNHGPP AAPIRVNDVF WEQFLTERPG  420
CPESEEADSN HRENLYKEPY DGRSGLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-138	HSF family protein