PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526141.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 386aa MW: 43076 Da PI: 8.4581

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.7	1.4e-29	244	303	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+ XP_023526141.1 244 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSVLVATYEGEHNHP 303 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MKHELLIDFE SDRQATWPSF PFLPYFLPFI HSFIHSNMPK SAHQIRTSSL KFPLPLLIYP 60 LPTPSGSSQN PTFSSFKLPP LMAAYSSWLD SVDTSLDLNL QPLRFSGEAP VSGEPSISVP 120 LLLCFSRTER NYMEVERKVS VKEETGALME ELKRVNAENK KLTEMLSVVC ENYNTLRGHL 180 MEQMNKSGEK EICCSSKKRK SESSESSSTD EDSFKEPKQE TMNKSAKITT VQVKIGASDS 240 NLVVKDGYQW RKYGQKVTRD NPCPRAYFKC SFAPTCPVKK KVQRSVEDQS VLVATYEGEH 300 NHPQASQIDP TSARSVSIAP APLTAAPRSL STPPKPTTEA KTISNPRFES PEVQQFLVEQ 360 MASSLTKDPN FTAALAAAIS GKIFQH

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MKHELLIDFE SDRQATWPSF PFLPYFLPFI HSFIHSNMPK SAHQIRTSSL KFPLPLLIYP  60
LPTPSGSSQN PTFSSFKLPP LMAAYSSWLD SVDTSLDLNL QPLRFSGEAP VSGEPSISVP  120
LLLCFSRTER NYMEVERKVS VKEETGALME ELKRVNAENK KLTEMLSVVC ENYNTLRGHL  180
MEQMNKSGEK EICCSSKKRK SESSESSSTD EDSFKEPKQE TMNKSAKITT VQVKIGASDS  240
NLVVKDGYQW RKYGQKVTRD NPCPRAYFKC SFAPTCPVKK KVQRSVEDQS VLVATYEGEH  300
NHPQASQIDP TSARSVSIAP APLTAAPRSL STPPKPTTEA KTISNPRFES PEVQQFLVEQ  360
MASSLTKDPN FTAALAAAIS GKIFQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	8e-83	WRKY family protein