PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526140.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 369aa    MW: 41317 Da    PI: 8.7422
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.3e-29227286159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+
  XP_023526140.1 227 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSVLVATYEGEHNHP 286
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MKHELLIDFE SDRQATWPSF PFLPYFLPFI HSFIHSNMPK SAHQIRTSSL KFPLPLLIYP  60
LPTPSGSSQN PTFSSFKLPP LMAAYSSWLD SVDTSLDLNL QPLRFSGEAP KERNYMEVER  120
KVSVKEETGA LMEELKRVNA ENKKLTEMLS VVCENYNTLR GHLMEQMNKS GEKEICCSSK  180
KRKSESSESS STDEDSFKEP KQETMNKSAK ITTVQVKIGA SDSNLVVKDG YQWRKYGQKV  240
TRDNPCPRAY FKCSFAPTCP VKKKVQRSVE DQSVLVATYE GEHNHPQASQ IDPTSARSVS  300
IAPAPLTAAP RSLSTPPKPT TEAKTISNPR FESPEVQQFL VEQMASSLTK DPNFTAALAA  360
AISGKIFQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.17e-86WRKY family protein