PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525965.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CO-like

Protein Properties

Length: 329aa MW: 35156.2 Da PI: 4.8322

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28.5	3.2e-09	22	66	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C+ +e+ ++ l C+ + lC+ C e+H+ H +vp+ XP_023525965.1 22 VICEACERSPAVLICKADAASLCAACDAEIHSAnplarrHHRVPI 66 69*****************************66899999877775 PP
2	CCT	70.6	3.8e-24	260	303	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_023525965.1 260 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 303 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MLKTEHDYFG GAAATATATT AVICEACERS PAVLICKADA ASLCAACDAE IHSANPLARR 60 HHRVPIGGAD MVGTTPECQE EEDEDEAASW LLLNPLKTNN ENRGGGSIQS NNNTNGLFLL 120 GGEDDYLNFV EFNGCGEDQF EGSENYGGGG GGGGGGGGGE DRVVPIEFEG KDPMLEQSYG 180 GVDGSYSYNG FLTHAVTSLP TSLLPSSMEV GVVPDSATTM SDISVFSNIR PPKGTIDLFS 240 GAADVAAVQM PATQLSPMDR EARVLRYREK KKTRKFEKTI RYASRKAYAE TRPRIKGRFA 300 KRTDVEVKLD RKFSSPLMAN VGYGIVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15840.1	1e-49	CO-like family protein