PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023525489.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 193aa MW: 21636.4 Da PI: 7.9701 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 101.2 | 1.8e-31 | 27 | 138 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssaseceaes 77 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ + + XP_023525489.1 27 FGGKDRHSKVYTIRGLRDRRIRLSISTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLpipsvslgldyqsmllphaQ----------- 110 689*************************************************************44444444433333333321........... PP TCP 78 ssssasnsssg.................kaaksaakskksqksaa 105 + + ++q++ + XP_023525489.1 111 --------TRPhrsefkigkeaedgvpaT---------DEQNELK 138 ........222222222222222222221.........2222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MPSSSSSTVT PWLRLKDPRI VRVSRAFGGK DRHSKVYTIR GLRDRRIRLS ISTAIQLYDL 60 QDRLGLNQPS KVVDWLLNAA KDEIDELPPL PIPSVSLGLD YQSMLLPHAQ TRPHRSEFKI 120 GKEAEDGVPA TDEQNELKPN SNPSQASSFS MLLNTVGAIP FGYHHWEAST PTPSNLPFFT 180 SQGEDLHNFI LNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.1 | 2e-46 | TCP family protein |