PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023525488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 194aa MW: 21707.5 Da PI: 7.9701 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 101.2 | 1.9e-31 | 28 | 139 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssaseceaes 77 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ + + XP_023525488.1 28 FGGKDRHSKVYTIRGLRDRRIRLSISTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLpipsvslgldyqsmllphaQ----------- 111 689*************************************************************44444444433333333321........... PP TCP 78 ssssasnsssg.................kaaksaakskksqksaa 105 + + ++q++ + XP_023525488.1 112 --------TRPhrsefkigkeaedgvpaT---------DEQNELK 139 ........222222222222222222221.........2222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MPASSSSSTV TPWLRLKDPR IVRVSRAFGG KDRHSKVYTI RGLRDRRIRL SISTAIQLYD 60 LQDRLGLNQP SKVVDWLLNA AKDEIDELPP LPIPSVSLGL DYQSMLLPHA QTRPHRSEFK 120 IGKEAEDGVP ATDEQNELKP NSNPSQASSF SMLLNTVGAI PFGYHHWEAS TPTPSNLPFF 180 TSQGEDLHNF ILNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.1 | 4e-46 | TCP family protein |