PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525483.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SRS
Protein Properties Length: 298aa    MW: 32984.5 Da    PI: 7.0322
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702210.63.9e-65902313154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                      g+++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqq ++++ +   + ++ ++kr+re+         + +++ a  +
  XP_023525483.1  90 GGGINCQDCGNQAKKDCTHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRQQQQFR-PDQFDQTTPKRHRET---------QPSIPPAAVT 174
                     5789**********************************************9998886554.455677778888875.........3445555556 PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     + le +++P+e +s+avfrcv+vs++d+ ee+laYqtav+igGh+fkGiLyd+G+e+
  XP_023525483.1 175 SGLELAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDHGPET 231
                     6789999************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MTGLLYLGGK QEDDQEQRGR EQQLFLYNSR NNEEIYSKGL EIWPQYGQQH QAVENYISFG  60
VGPSRMNLMI NASDHDFAMM RQGAATGGGG GGINCQDCGN QAKKDCTHLR CRTCCKSRGF  120
HCQTHVKSTW VPAAKRRERQ QQRQQQQFRP DQFDQTTPKR HRETQPSIPP AAVTSGLELA  180
HFPAEFNSPA VFRCVKVSAI DNVEEQLAYQ TAVNIGGHMF KGILYDHGPE TSQNLSTGGE  240
SSYSHGGDDD GQGLDLVIGA SNSFGRVNPS ASFVESSLYP IPINTFTPGM QNFPSSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.12e-58SRS family protein