PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023525316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Dof | ||||||||
Protein Properties | Length: 266aa MW: 29561.9 Da PI: 8.4618 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.9 | 1.2e-39 | 32 | 91 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s XP_023525316.1 32 PKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRS 91 7899******************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MDLSAAVNHQ EIEQQQHSKP SLDQTRKPRP QPKQALKCPR CDSPNTKFCY YNNYSLSQPR 60 YFCKSCRRYW TQGGTLRNVP VGGGCRKNKR SFSSANSSSL SSSSSKKPQD HPFAAAAVAT 120 VLPHLSYDHQ GLAFARLHKN SCGSVTPTFN DFDFPTLGMP NGDVLNGFPY NSQGMYYDNN 180 NNNIGGIESA IDQMRLQPYD QDHHATTTAV TVTTMKQEVY NAGDESKIVW GYANNNGIMD 240 SNMMMGMDFG FSNASSWHGL LNSPLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 6e-39 | Dof family protein |