PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525294.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 324aa    MW: 36097.9 Da    PI: 4.6417
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.2e-11160203654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL   ++Y+k+L
  XP_023525294.1 160 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADSIDYVKEL 203
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MELNEHCLLD ELQALRREIN WELAMPTEIN ELISTANGWN FDCSDSFPFS LPIDHQDFGY  60
LLGGEDDYSF SGGQFTAAPS TGDSMSYTTF ETTPGGFGRC PVVEEEDEIP NLEVLGSCKM  120
EPAYSPEIAP VFNAGGTCDF GQKIVGSASK KLQGKPSKNL MAERRRRKRL NDRLSMLRSI  180
VPKISKMDRT AILADSIDYV KELLEKINHL QREIEMTNPS KSESMGILRA EKPSEYLVRN  240
SPKFNVERRE GDTRIEICCA AKPGLLLSTV HTLEALGLDI QQCVISCFND FAIQASCSEG  300
TERRPVEEVK QALFENAGYG GRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163170ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-76bHLH family protein