PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525285.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 513aa MW: 56919.8 Da PI: 5.9545

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.9	9.2e-07	259	280	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H XP_023525285.1 259 FCAICGKGFKRDANLRMHMRGH 280 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MDPEDSLCSS EVWTKSSSFP NIDAQQPEQK WVDTSILDYA MDQPFQEFEE QTESKASLTC 60 NSNQQIGILN KDGDQMNAAI LGSKVQDWDP RAMLSNLSFL EQKVHQLQEL VHLIIGRRSQ 120 VLGRPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH NFSAAVPLVG QLEAPLDRVL 180 FASESGTKNG VVQSQHGDGT KLPEVPTQVD ESSKYGKERI EEHESKDEED ADESENLPPG 240 SYEILQLEKE EILAPHTHFC AICGKGFKRD ANLRMHMRGH GDEYKTAAAL AKPNKEASYE 300 TMLIKRYSCP FTGCKRNKDH KKFQPLKTIL CVKNHYKRTH CDKSFTCSKC NSKKFSVIAD 360 LKTHEKHCGK DKWLCSCGTT FSRKDKLFGH IALFQGHTPA IPLEESKGTA MSCDRGERYE 420 TANKLGSINF SFGSIASGGS SVETIAAADA KGGVDDPLTY FSPLNFDPCN FGGYHEFPRP 480 PFENAENAFS FLIPTSSNYN QKSGAESSCN NLE

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MDPEDSLCSS EVWTKSSSFP NIDAQQPEQK WVDTSILDYA MDQPFQEFEE QTESKASLTC  60
NSNQQIGILN KDGDQMNAAI LGSKVQDWDP RAMLSNLSFL EQKVHQLQEL VHLIIGRRSQ  120
VLGRPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH NFSAAVPLVG QLEAPLDRVL  180
FASESGTKNG VVQSQHGDGT KLPEVPTQVD ESSKYGKERI EEHESKDEED ADESENLPPG  240
SYEILQLEKE EILAPHTHFC AICGKGFKRD ANLRMHMRGH GDEYKTAAAL AKPNKEASYE  300
TMLIKRYSCP FTGCKRNKDH KKFQPLKTIL CVKNHYKRTH CDKSFTCSKC NSKKFSVIAD  360
LKTHEKHCGK DKWLCSCGTT FSRKDKLFGH IALFQGHTPA IPLEESKGTA MSCDRGERYE  420
TANKLGSINF SFGSIASGGS SVETIAAADA KGGVDDPLTY FSPLNFDPCN FGGYHEFPRP  480
PFENAENAFS FLIPTSSNYN QKSGAESSCN NLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein