PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525229.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 434aa MW: 48288.7 Da PI: 6.4716

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23	1.4e-07	383	416	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_023525229.1 383 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 416 469*****************************87 PP
2	ELK	22.5	2.8e-08	337	358	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+ +Y+++++++++E++ XP_023525229.1 337 ELKHELKAGYKEKIVDIREEIL 358 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MAYHNPLSHD LPLHFSDQQP PQNQPLSDAS LRTILPDPKS HHHHHHPPQT APNWLNNALL 60 RNQNPHSHYS TDTTTTATAA VNTNFLNLHT TASDSTVSHS SNQWLSRPIL QRNHSDVIDD 120 VATAGDAMIG AANDANSGDG LNKSDGMTVE PGGGGSGGGG EGVLNWQYAR YKAEILAHPL 180 YEQLLSAHVA CLRIATPVDQ LPRIDAQLAQ SQNVVAKYSA LGHTAPLMVG DDKDLDQFMT 240 HYVLLLCSFK EQLQQHVRVH AMEAVMACWD IEQSLQSLTG VSPGEGTGAT MSDDDDDQVD 300 SDANLFEASL DCPDTMGFGP LIPTETERSL MERVRQELKH ELKAGYKEKI VDIREEILRK 360 RRAGKLPGDT TSVLKQWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS 420 NPSSSTNLKS KRKR

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MAYHNPLSHD LPLHFSDQQP PQNQPLSDAS LRTILPDPKS HHHHHHPPQT APNWLNNALL  60
RNQNPHSHYS TDTTTTATAA VNTNFLNLHT TASDSTVSHS SNQWLSRPIL QRNHSDVIDD  120
VATAGDAMIG AANDANSGDG LNKSDGMTVE PGGGGSGGGG EGVLNWQYAR YKAEILAHPL  180
YEQLLSAHVA CLRIATPVDQ LPRIDAQLAQ SQNVVAKYSA LGHTAPLMVG DDKDLDQFMT  240
HYVLLLCSFK EQLQQHVRVH AMEAVMACWD IEQSLQSLTG VSPGEGTGAT MSDDDDDQVD  300
SDANLFEASL DCPDTMGFGP LIPTETERSL MERVRQELKH ELKAGYKEKI VDIREEILRK  360
RRAGKLPGDT TSVLKQWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS  420
NPSSSTNLKS KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	414	434	RKRNWHSNPSSSTNLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein