PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525211.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 432aa MW: 47018.7 Da PI: 6.7105

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117	2.4e-36	43	152	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai++l +++ +++ +++s++s++++++++ XP_023525211.1 43 GRKDRHSKVCTARGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPAIDKLRELPGWNPNGLNTSSEKSATQKDEKNsenkipvsv 137 89*************************************************************55555444444444444433333222333444 PP TCP 89 ..............k 89 + XP_023525211.1 138 hppegsttrnfvagN 152 444444444444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MGEFGHQQPT KSSRLGMRST GGGSGGGGEI LEVQGGHIVR SIGRKDRHSK VCTARGPRDR 60 RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLRELPGWNP NGLNTSSEKS 120 ATQKDEKNSE NKIPVSVHPP EGSTTRNFVA GNGGVSECTM KNLQNGSTED NPNSDNSSFL 180 PPSFDSDSIV NTVKSFLPTT TTTTTTAAAE TPSSIFEFDA FPPDLLSRTS SRAQDLRLSL 240 QSFEGSISKL ESERTQHSIT QNHQNDHPFF SGSTPLAGFD GWSEQHPQSA MEIGRLQRIL 300 HWNTVNADLS GVDGGVNGEF LYNSQPTTSS FQPPSPSPIL QPLFGENQLV SQRGPLQSSY 360 TPSIRAWIDP SITFFDNQQH PTPPSIYQST FPGLGFASGG FPRFLIPARI PGEEEHDGIS 420 EKPSSASSNS RH

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MGEFGHQQPT KSSRLGMRST GGGSGGGGEI LEVQGGHIVR SIGRKDRHSK VCTARGPRDR  60
RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLRELPGWNP NGLNTSSEKS  120
ATQKDEKNSE NKIPVSVHPP EGSTTRNFVA GNGGVSECTM KNLQNGSTED NPNSDNSSFL  180
PPSFDSDSIV NTVKSFLPTT TTTTTTAAAE TPSSIFEFDA FPPDLLSRTS SRAQDLRLSL  240
QSFEGSISKL ESERTQHSIT QNHQNDHPFF SGSTPLAGFD GWSEQHPQSA MEIGRLQRIL  300
HWNTVNADLS GVDGGVNGEF LYNSQPTTSS FQPPSPSPIL QPLFGENQLV SQRGPLQSSY  360
TPSIRAWIDP SITFFDNQQH PTPPSIYQST FPGLGFASGG FPRFLIPARI PGEEEHDGIS  420
EKPSSASSNS RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-79	TCP family protein