PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525154.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 384aa MW: 41326.3 Da PI: 10.1337

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	313	370	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYe++Hnh XP_023525154.1 313 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYENDHNHA 370 99**********************998**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MLLLKNNMAV EFMVGFGDAA ANFTPSMEEN AAVSAVQEAA SAGIQSVHSF LTLVSHTPNQ 60 HHSQHDSSTS TAPDAAAGYE AVADSVVNKF KKVISLLDRN RTGHARFRRA PVDSTASSPP 120 KVKPQHQDPS SSSPISVPQL KKQESVSAFK VYCPTPYSVV RLPGLPNNNP HQPSNQPSNQ 180 PSTFQPQQNN SSGGLKNGSV NRKDSTSAIN FAASPSISAA NSYISSLTGD TESLHPSLSS 240 GFQFTNMSQV SSAGKPPLSS SSLKRKCNSM DDSARKCGSS SGRCHCSKKR KNRMKRVIRV 300 PAVSAKLADI PPDDYSWRKY GQKPIKGSPH PRGYYKCSSL RGCPARKHVE RALDDPTMLI 360 VTYENDHNHA LSTQTPAPLL LESS

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MLLLKNNMAV EFMVGFGDAA ANFTPSMEEN AAVSAVQEAA SAGIQSVHSF LTLVSHTPNQ  60
HHSQHDSSTS TAPDAAAGYE AVADSVVNKF KKVISLLDRN RTGHARFRRA PVDSTASSPP  120
KVKPQHQDPS SSSPISVPQL KKQESVSAFK VYCPTPYSVV RLPGLPNNNP HQPSNQPSNQ  180
PSTFQPQQNN SSGGLKNGSV NRKDSTSAIN FAASPSISAA NSYISSLTGD TESLHPSLSS  240
GFQFTNMSQV SSAGKPPLSS SSLKRKCNSM DDSARKCGSS SGRCHCSKKR KNRMKRVIRV  300
PAVSAKLADI PPDDYSWRKY GQKPIKGSPH PRGYYKCSSL RGCPARKHVE RALDDPTMLI  360
VTYENDHNHA LSTQTPAPLL LESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	4e-86	WRKY family protein