PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023524891.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 638aa MW: 70618.7 Da PI: 6.8298 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 343.8 | 2.9e-105 | 274 | 638 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 + ++e+A a+s+g+l ++++L+ + ++++ +g+++qRla y++ AL++r++ + +pp ++ +e+ aa++ +++vsP++k+++++ XP_023524891.1 274 QSVIEAAAAISEGKLDVVDEILSPVVKISNARGSSVQRLAEYMVFALKSRVNP------AEFPPPVAE-IFGDEHSAATQSLYDVSPCFKLAFMA 361 6789************************************************9......444444333.46999********************* PP GRAS 98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191 aN aIlea+e+e +++H++Dfdi++G+Q+++L++ L+ R++g+ +++T+v++ e+g+ e+l+++ge L+++A+elgv f+fn+ v ++l++l+ XP_023524891.1 362 ANLAILEAIEEEdRKLHVVDFDIGKGGQYMNLIHLLSGRQKGKVAVKLTAVVA-ENGRDERLKHVGESLSQLAKELGVGFKFNL-VKHELAELTR 454 ************7788*************************************.779**************************9.799******* PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286 e+L ++ +E+laVn++++l++++desvs+e++rde+L+ vk P vv+v+eqe+++n+++F++r++e++ yy +lfds+++++ ++ +r+kvE XP_023524891.1 455 ESLGCDADESLAVNFAFKLYQMPDESVSTENPRDELLRRVKAWAPAVVTVMEQELNTNTAPFAARVSESCIYYGSLFDSIDSTMWCDHPDRVKVE 549 *********************************************************************************************** PP GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374 + lgr++ n +aceg+er+er+e +kWr+r+++aGF++ ++se +a+++k+ l+ + + g++v+ee+g +++gW++r+L++++aWr XP_023524891.1 550 EG-LGRKLANSLACEGRERVERCEVSGKWRARMGMAGFESRRMSEMVAESMKTRLSSGYrvNPGFTVKEENGGICFGWMGRTLTVTTAWR 638 **.*************************************************98887655889**************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence |
MQSTLSFYII YILHNSLFPF HSLRRYRHRE RQRITEMQSG FTGGGPPDFY TSGRSMANPS 60 HPNPYRSQLS GGAFVDPTIP QIARQIPSSL LGKRNLSDLH SLNQYTHHNL PVNNLFLRSV 120 KPRAGFSHPI SPLSNFDLYS TMSLPSSEVQ THRLYGSSSA AVLQQLRQQP NSSAVTLRDL 180 QNLESEKKMM MNHRLQELEK QLLEDNDDDD GSDAASVITS STSAWCETMY NLISPTAPPN 240 QKPVSTSPTT SASSSCSSST SSSVASPSSD SWKQSVIEAA AAISEGKLDV VDEILSPVVK 300 ISNARGSSVQ RLAEYMVFAL KSRVNPAEFP PPVAEIFGDE HSAATQSLYD VSPCFKLAFM 360 AANLAILEAI EEEDRKLHVV DFDIGKGGQY MNLIHLLSGR QKGKVAVKLT AVVAENGRDE 420 RLKHVGESLS QLAKELGVGF KFNLVKHELA ELTRESLGCD ADESLAVNFA FKLYQMPDES 480 VSTENPRDEL LRRVKAWAPA VVTVMEQELN TNTAPFAARV SESCIYYGSL FDSIDSTMWC 540 DHPDRVKVEE GLGRKLANSL ACEGRERVER CEVSGKWRAR MGMAGFESRR MSEMVAESMK 600 TRLSSGYRVN PGFTVKEENG GICFGWMGRT LTVTTAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52510.1 | 1e-133 | GRAS family protein |