PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524891.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 638aa    MW: 70618.7 Da    PI: 6.8298
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524891.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS343.82.9e-1052746383374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + ++e+A a+s+g+l  ++++L+ + ++++ +g+++qRla y++ AL++r++       + +pp  ++    +e+ aa++ +++vsP++k+++++
  XP_023524891.1 274 QSVIEAAAAISEGKLDVVDEILSPVVKISNARGSSVQRLAEYMVFALKSRVNP------AEFPPPVAE-IFGDEHSAATQSLYDVSPCFKLAFMA 361
                     6789************************************************9......444444333.46999********************* PP

            GRAS  98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     aN aIlea+e+e +++H++Dfdi++G+Q+++L++ L+ R++g+  +++T+v++ e+g+ e+l+++ge L+++A+elgv f+fn+ v ++l++l+ 
  XP_023524891.1 362 ANLAILEAIEEEdRKLHVVDFDIGKGGQYMNLIHLLSGRQKGKVAVKLTAVVA-ENGRDERLKHVGESLSQLAKELGVGFKFNL-VKHELAELTR 454
                     ************7788*************************************.779**************************9.799******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     e+L ++ +E+laVn++++l++++desvs+e++rde+L+ vk   P vv+v+eqe+++n+++F++r++e++ yy +lfds+++++  ++ +r+kvE
  XP_023524891.1 455 ESLGCDADESLAVNFAFKLYQMPDESVSTENPRDELLRRVKAWAPAVVTVMEQELNTNTAPFAARVSESCIYYGSLFDSIDSTMWCDHPDRVKVE 549
                     *********************************************************************************************** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +  lgr++ n +aceg+er+er+e  +kWr+r+++aGF++ ++se +a+++k+ l+  +  + g++v+ee+g +++gW++r+L++++aWr
  XP_023524891.1 550 EG-LGRKLANSLACEGRERVERCEVSGKWRARMGMAGFESRRMSEMVAESMKTRLSSGYrvNPGFTVKEENGGICFGWMGRTLTVTTAWR 638
                     **.*************************************************98887655889**************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    
MQSTLSFYII YILHNSLFPF HSLRRYRHRE RQRITEMQSG FTGGGPPDFY TSGRSMANPS  60
HPNPYRSQLS GGAFVDPTIP QIARQIPSSL LGKRNLSDLH SLNQYTHHNL PVNNLFLRSV  120
KPRAGFSHPI SPLSNFDLYS TMSLPSSEVQ THRLYGSSSA AVLQQLRQQP NSSAVTLRDL  180
QNLESEKKMM MNHRLQELEK QLLEDNDDDD GSDAASVITS STSAWCETMY NLISPTAPPN  240
QKPVSTSPTT SASSSCSSST SSSVASPSSD SWKQSVIEAA AAISEGKLDV VDEILSPVVK  300
ISNARGSSVQ RLAEYMVFAL KSRVNPAEFP PPVAEIFGDE HSAATQSLYD VSPCFKLAFM  360
AANLAILEAI EEEDRKLHVV DFDIGKGGQY MNLIHLLSGR QKGKVAVKLT AVVAENGRDE  420
RLKHVGESLS QLAKELGVGF KFNLVKHELA ELTRESLGCD ADESLAVNFA FKLYQMPDES  480
VSTENPRDEL LRRVKAWAPA VVTVMEQELN TNTAPFAARV SESCIYYGSL FDSIDSTMWC  540
DHPDRVKVEE GLGRKLANSL ACEGRERVER CEVSGKWRAR MGMAGFESRR MSEMVAESMK  600
TRLSSGYRVN PGFTVKEENG GICFGWMGRT LTVTTAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-133GRAS family protein