PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524610.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 272aa    MW: 29366.4 Da    PI: 7.9311
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002289111123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023524610.1  89 FSCNYCQRKFYSSQALGGHQNAH 111
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MDPHAYTKRN GPSPSESSTI ISASESSPPC PKEDQATDQI NPNSQLGFDL SLCNNDSDHG  60
SNPELNLIDC FDANLAAEPT DTETEPRVFS CNYCQRKFYS SQALGGHQNA HKRERTLAKR  120
THRVGSGSNF GFAHRYSNLP SLHLHGSFSR SLGIQAHSMV HKPSSFHVSG IGSSGIYGHS  180
GWSRQPLDQQ PAIGRLPQGS SHIGSLRCIT SNTGAARFDG VKKFSTTETP PPLEGFWWDS  240
SGSGSGGGGG FSHLKMKAKQ DELLKLDLSL KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.12e-41C2H2 family protein