PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023524391.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21430.3 Da PI: 9.3246 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.8e-18 | 6 | 54 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 +++GVr++ +g+Wv+eIr+p +r++lg+f+tae+Aa+a+++a ++ XP_023524391.1 6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFDTAEDAARAYDQASILMN 54 89****999.**********8.....334********************976665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 192 aa Download sequence |
MVYSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFDTAE DAARAYDQAS ILMNGQNAKT 60 NFPASKDRSE SHGHGASPLS PKALSELLST KLKKCCKNPS PSLTCLRLDS DNAHIGVWQK 120 RAGTRAASDW VMRIELGKKE TPSPSMPLSP LPEPASQEAE GRQNGIDEED RIAMQMIEEL 180 LSWNCPLPST SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25390.2 | 2e-78 | ERF family protein |