PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524324.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Trihelix
Protein Properties Length: 290aa    MW: 33095.6 Da    PI: 4.3966
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.31.9e-082699276
        trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76
                    Wt    l+L+++   +e +  ++ +  ++W+ v++++ +  + r+++qC+ kw+ l  ++  i+++e +  +++ 
  XP_023524324.1 26 WTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAENCTSLDVARNSNQCRRKWDCLLIEHDVIRQWELEM-PDDD 99
                    ******************************************************9999999999998775.4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MKEEDGKRGT EVSGSRRTRS RIAPDWTAAD CLVLVNVIAA VEADCWKALS SFQKWKIVAE  60
NCTSLDVARN SNQCRRKWDC LLIEHDVIRQ WELEMPDDDS YWCLESERRK ELGLPDNFDE  120
ELFKAIDNVV SMRANQSDTE PDSDPEAAVE KVDEAAEPGP KRQRRCSMST RNQALEKSVK  180
CEGEEEEEPP VSSPEVERRG CYIKSHGEKT TDSTEPEEQT MAKKLLETAE KVQAIVSENA  240
EYATSDEKND NDNYNVRTNS IRRQGSKLIK CLEDFLNTIN DLHSLLEDQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.16e-56Trihelix family protein