PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524270.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 346aa    MW: 37318.1 Da    PI: 10.0965
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524270.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.63.9e-31270327359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeH+h+
  XP_023524270.1 270 DEYSWRKYGQKPIKGSPYPRGYYKCSSMrGCPARKHVERDPNDPAMLIVTYEGEHRHT 327
                     9************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MAVDLMSFPK MDDQMAIQEA ASQGLKSMEH LVRLLSHKQS SNHVDCSDLT DATVSKFKKV  60
ISLLNRTGHA RFRRGPVSNS TSSSSSGSVP QNQAMNITPT PFTSSATVSA PSFTAPVTVA  120
QPLTKVAAAA NFLQSQPQSM TLDFTRPNIL NSNPKGTDLE FSKDTFSVSS SSSFMSSAIT  180
GDGSVSNGKL GTSIFLAPAP SASGGKPPLS APPYKKRCHE HDYSEDLSGK FSGSTSASGK  240
CHCSKRRKNR MKKTIRVPAI SSKIADIPPD EYSWRKYGQK PIKGSPYPRG YYKCSSMRGC  300
PARKHVERDP NDPAMLIVTY EGEHRHTQSS LPENMATGVA LVFESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-121WRKY family protein