PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523750.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 303aa MW: 33552.7 Da PI: 8.9434

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.6	7.1e-30	159	218	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ XP_023523750.1 159 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSILVATYEGEHNHP 218 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MASSYSSWLD SVDTSLDLNL HPLRFTGEAP VTKERNYLDH EKVSVKEETG ALMEELKRVS 60 AENKKLTEML TVVCENYNTL RGHLVDQMNK NGEKEVFCSK KRKSESSNNN NMVGINGNSE 120 SSSTDEESYK KPKQETINKS SKTTRVQVKI GASDSNLVVK DGYQWRKYGQ KVTRDNPCPR 180 AYFKCSFAPT CPVKKKVQRS VEDQSILVAT YEGEHNHPQS SLMEATSGTA AARCVGLTPA 240 APTTPLDSRK PKSPSEAKTT SSPRFQSPEM QQFLVEQMAS SLTKDPNFTA ALAAAISGKI 300 FPH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	133	KKRKSESSNNNNMVGINGNSESSSTDEESYKKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	8e-87	WRKY family protein