PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023523748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 332aa MW: 36783.4 Da PI: 8.5499 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.4 | 8.2e-30 | 188 | 247 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ XP_023523748.1 188 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSILVATYEGEHNHP 247 58***************************99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MASSYSSWLD SVDTSLDLNL HPLRFTGEAP VTVSETASSS VLVYTQMGFL FSELGFFLFL 60 QKERNYLDHE KVSVKEETGA LMEELKRVSA ENKKLTEMLT VVCENYNTLR GHLVDQMNKN 120 GEKEVFCSKK RKSESSNNNN MVGINGNSES SSTDEESYKK PKQETINKSS KTTRVQVKIG 180 ASDSNLVVKD GYQWRKYGQK VTRDNPCPRA YFKCSFAPTC PVKKKVQRSV EDQSILVATY 240 EGEHNHPQSS LMEATSGTAA ARCVGLTPAA PTTPLDSRKP KSPSEAKTTS SPRFQSPEMQ 300 QFLVEQMASS LTKDPNFTAA LAAAISGKIF PH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 162 | KKRKSESSNNNNMVGINGNSESSSTDEESYKKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 1e-84 | WRKY family protein |